Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn10aQ6QIY3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn10aQ6QIY3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 Gm18671-201ENSMUST00000214826 683 ntBASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.77■■□□□ 1.4
Scn10aQ6QIY3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Scn10aQ6QIY3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn10aQ6QIY3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn10aQ6QIY3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn10aQ6QIY3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.72■■□□□ 1.39
Scn10aQ6QIY3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn10aQ6QIY3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.72■■□□□ 1.39
Scn10aQ6QIY3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn10aQ6QIY3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn10aQ6QIY3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn10aQ6QIY3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Scn10aQ6QIY3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scn10aQ6QIY3 Gm11421-201ENSMUST00000122124 294 ntBASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scn10aQ6QIY3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scn10aQ6QIY3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.67■■□□□ 1.38
Scn10aQ6QIY3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Scn10aQ6QIY3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Scn10aQ6QIY3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Scn10aQ6QIY3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.66■■□□□ 1.38
Scn10aQ6QIY3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.65■■□□□ 1.38
Scn10aQ6QIY3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn10aQ6QIY3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn10aQ6QIY3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms