Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim45Q6PFY8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim45Q6PFY8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim45Q6PFY8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim45Q6PFY8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim45Q6PFY8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim45Q6PFY8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim45Q6PFY8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim45Q6PFY8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim45Q6PFY8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim45Q6PFY8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim45Q6PFY8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim45Q6PFY8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim45Q6PFY8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim45Q6PFY8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim45Q6PFY8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 Gm12922-201ENSMUST00000120626 809 ntBASIC19.17■□□□□ 0.66
Trim45Q6PFY8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim45Q6PFY8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim45Q6PFY8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim45Q6PFY8 Gm13241-201ENSMUST00000094493 780 ntBASIC19.16■□□□□ 0.66
Trim45Q6PFY8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim45Q6PFY8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.16■□□□□ 0.66
Trim45Q6PFY8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim45Q6PFY8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim45Q6PFY8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim45Q6PFY8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim45Q6PFY8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim45Q6PFY8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim45Q6PFY8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim45Q6PFY8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim45Q6PFY8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim45Q6PFY8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms