Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sp140Q6NSQ5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sp140Q6NSQ5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sp140Q6NSQ5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sp140Q6NSQ5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sp140Q6NSQ5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.76■□□□□ 0.91
Sp140Q6NSQ5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sp140Q6NSQ5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sp140Q6NSQ5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sp140Q6NSQ5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sp140Q6NSQ5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sp140Q6NSQ5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sp140Q6NSQ5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sp140Q6NSQ5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sp140Q6NSQ5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sp140Q6NSQ5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sp140Q6NSQ5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sp140Q6NSQ5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sp140Q6NSQ5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sp140Q6NSQ5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sp140Q6NSQ5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sp140Q6NSQ5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sp140Q6NSQ5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sp140Q6NSQ5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.7■□□□□ 0.9
Sp140Q6NSQ5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Gm15820-201ENSMUST00000201566 728 ntBASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.69■□□□□ 0.9
Sp140Q6NSQ5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Gm40881-201ENSMUST00000223397 166 ntBASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sp140Q6NSQ5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sp140Q6NSQ5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Gm5812-201ENSMUST00000061073 957 ntBASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sp140Q6NSQ5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms