Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt42Q6IFX2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
Krt42Q6IFX2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt42Q6IFX2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Krt42Q6IFX2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Krt42Q6IFX2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Krt42Q6IFX2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt42Q6IFX2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt42Q6IFX2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Krt42Q6IFX2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt42Q6IFX2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.97■□□□□ 0.95
Krt42Q6IFX2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt42Q6IFX2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt42Q6IFX2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.95■□□□□ 0.94
Krt42Q6IFX2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt42Q6IFX2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.95■□□□□ 0.94
Krt42Q6IFX2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.95■□□□□ 0.94
Krt42Q6IFX2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt42Q6IFX2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt42Q6IFX2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt42Q6IFX2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt42Q6IFX2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt42Q6IFX2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt42Q6IFX2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.93■□□□□ 0.94
Krt42Q6IFX2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.92■□□□□ 0.94
Krt42Q6IFX2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt42Q6IFX2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt42Q6IFX2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms