Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VclQ64727 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VclQ64727 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VclQ64727 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
VclQ64727 Gm7143-201ENSMUST00000222811 859 ntBASIC20.07■□□□□ 0.8
VclQ64727 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VclQ64727 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.07■□□□□ 0.8
VclQ64727 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VclQ64727 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VclQ64727 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VclQ64727 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.06■□□□□ 0.8
VclQ64727 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.06■□□□□ 0.8
VclQ64727 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VclQ64727 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VclQ64727 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VclQ64727 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VclQ64727 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VclQ64727 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.05■□□□□ 0.8
VclQ64727 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VclQ64727 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
VclQ64727 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.05■□□□□ 0.8
VclQ64727 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VclQ64727 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.05■□□□□ 0.8
VclQ64727 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VclQ64727 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VclQ64727 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VclQ64727 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VclQ64727 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VclQ64727 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VclQ64727 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VclQ64727 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VclQ64727 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.04■□□□□ 0.8
VclQ64727 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VclQ64727 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VclQ64727 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
VclQ64727 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VclQ64727 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.03■□□□□ 0.8
VclQ64727 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.03■□□□□ 0.8
VclQ64727 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.03■□□□□ 0.8
VclQ64727 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VclQ64727 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VclQ64727 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VclQ64727 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VclQ64727 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VclQ64727 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VclQ64727 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.02■□□□□ 0.79
VclQ64727 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VclQ64727 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VclQ64727 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VclQ64727 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.01■□□□□ 0.79
VclQ64727 Golgb1-201ENSMUST00000023534 498 ntBASIC20.01■□□□□ 0.79
VclQ64727 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
VclQ64727 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VclQ64727 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VclQ64727 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VclQ64727 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VclQ64727 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VclQ64727 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VclQ64727 Gm43034-201ENSMUST00000198678 1364 ntBASIC20■□□□□ 0.79
VclQ64727 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20■□□□□ 0.79
VclQ64727 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VclQ64727 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.99■□□□□ 0.79
VclQ64727 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VclQ64727 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VclQ64727 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VclQ64727 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.98■□□□□ 0.79
VclQ64727 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.98■□□□□ 0.79
VclQ64727 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
VclQ64727 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.98■□□□□ 0.79
VclQ64727 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VclQ64727 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
VclQ64727 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms