Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sdc3Q64519 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.57■□□□□ 0.72
Sdc3Q64519 Gm12922-201ENSMUST00000120626 809 ntBASIC19.56■□□□□ 0.72
Sdc3Q64519 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.56■□□□□ 0.72
Sdc3Q64519 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.56■□□□□ 0.72
Sdc3Q64519 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.56■□□□□ 0.72
Sdc3Q64519 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.56■□□□□ 0.72
Sdc3Q64519 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Sdc3Q64519 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sdc3Q64519 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sdc3Q64519 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.55■□□□□ 0.72
Sdc3Q64519 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc3Q64519 Golgb1-201ENSMUST00000023534 498 ntBASIC19.55■□□□□ 0.72
Sdc3Q64519 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sdc3Q64519 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.55■□□□□ 0.72
Sdc3Q64519 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.54■□□□□ 0.72
Sdc3Q64519 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.54■□□□□ 0.72
Sdc3Q64519 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.54■□□□□ 0.72
Sdc3Q64519 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc3Q64519 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc3Q64519 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc3Q64519 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.54■□□□□ 0.72
Sdc3Q64519 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc3Q64519 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc3Q64519 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc3Q64519 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sdc3Q64519 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.53■□□□□ 0.72
Sdc3Q64519 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc3Q64519 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.53■□□□□ 0.72
Sdc3Q64519 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sdc3Q64519 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc3Q64519 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc3Q64519 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc3Q64519 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sdc3Q64519 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc3Q64519 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc3Q64519 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.51■□□□□ 0.71
Sdc3Q64519 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc3Q64519 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sdc3Q64519 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.51■□□□□ 0.71
Sdc3Q64519 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc3Q64519 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc3Q64519 Gm9870-201ENSMUST00000063874 645 ntBASIC19.5■□□□□ 0.71
Sdc3Q64519 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
Sdc3Q64519 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc3Q64519 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc3Q64519 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Sdc3Q64519 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc3Q64519 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.49■□□□□ 0.71
Sdc3Q64519 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc3Q64519 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.49■□□□□ 0.71
Sdc3Q64519 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Sdc3Q64519 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc3Q64519 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc3Q64519 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdc3Q64519 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc3Q64519 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sdc3Q64519 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc3Q64519 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc3Q64519 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc3Q64519 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Sdc3Q64519 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc3Q64519 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sdc3Q64519 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc3Q64519 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sdc3Q64519 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc3Q64519 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc3Q64519 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sdc3Q64519 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.46■□□□□ 0.71
Sdc3Q64519 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sdc3Q64519 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc3Q64519 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc3Q64519 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.45■□□□□ 0.7
Sdc3Q64519 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc3Q64519 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.45■□□□□ 0.7
Sdc3Q64519 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc3Q64519 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.45■□□□□ 0.7
Sdc3Q64519 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sdc3Q64519 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sdc3Q64519 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc3Q64519 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc3Q64519 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc3Q64519 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sdc3Q64519 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc3Q64519 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sdc3Q64519 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Sdc3Q64519 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms