Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.99■□□□□ 0.79
Six3Q62233 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six3Q62233 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Six3Q62233 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six3Q62233 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Six3Q62233 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Six3Q62233 Notumos-201ENSMUST00000151998 2659 ntBASIC19.99■□□□□ 0.79
Six3Q62233 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Six3Q62233 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six3Q62233 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.98■□□□□ 0.79
Six3Q62233 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six3Q62233 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.96■□□□□ 0.79
Six3Q62233 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Six3Q62233 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Six3Q62233 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six3Q62233 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six3Q62233 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six3Q62233 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.95■□□□□ 0.78
Six3Q62233 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six3Q62233 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six3Q62233 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six3Q62233 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Six3Q62233 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Six3Q62233 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six3Q62233 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Six3Q62233 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six3Q62233 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
Six3Q62233 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Six3Q62233 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Six3Q62233 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.93■□□□□ 0.78
Six3Q62233 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.93■□□□□ 0.78
Six3Q62233 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six3Q62233 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.92■□□□□ 0.78
Six3Q62233 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six3Q62233 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six3Q62233 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Six3Q62233 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Six3Q62233 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.9■□□□□ 0.78
Six3Q62233 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.9■□□□□ 0.78
Six3Q62233 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Six3Q62233 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Six3Q62233 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Six3Q62233 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Six3Q62233 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Six3Q62233 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Six3Q62233 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms