Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.07■□□□□ 0.8
Rai1Q61818 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rai1Q61818 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rai1Q61818 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rai1Q61818 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rai1Q61818 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.06■□□□□ 0.8
Rai1Q61818 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rai1Q61818 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rai1Q61818 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rai1Q61818 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.05■□□□□ 0.8
Rai1Q61818 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rai1Q61818 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rai1Q61818 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rai1Q61818 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rai1Q61818 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Rai1Q61818 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rai1Q61818 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rai1Q61818 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rai1Q61818 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rai1Q61818 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rai1Q61818 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rai1Q61818 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rai1Q61818 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rai1Q61818 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rai1Q61818 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rai1Q61818 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rai1Q61818 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.04■□□□□ 0.8
Rai1Q61818 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.04■□□□□ 0.8
Rai1Q61818 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.03■□□□□ 0.8
Rai1Q61818 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rai1Q61818 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.03■□□□□ 0.8
Rai1Q61818 Gm27405-201ENSMUST00000184201 112 ntBASIC20.03■□□□□ 0.8
Rai1Q61818 Gm43060-201ENSMUST00000200621 289 ntBASIC20.03■□□□□ 0.8
Rai1Q61818 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rai1Q61818 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rai1Q61818 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rai1Q61818 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rai1Q61818 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Rai1Q61818 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rai1Q61818 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rai1Q61818 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rai1Q61818 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rai1Q61818 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rai1Q61818 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Rai1Q61818 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Gm37179-201ENSMUST00000194862 823 ntBASIC20.01■□□□□ 0.79
Rai1Q61818 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rai1Q61818 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rai1Q61818 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.01■□□□□ 0.79
Rai1Q61818 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.01■□□□□ 0.79
Rai1Q61818 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20■□□□□ 0.79
Rai1Q61818 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20■□□□□ 0.79
Rai1Q61818 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20■□□□□ 0.79
Rai1Q61818 Gm10209-201ENSMUST00000203397 1607 ntBASIC20■□□□□ 0.79
Rai1Q61818 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rai1Q61818 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rai1Q61818 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rai1Q61818 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rai1Q61818 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rai1Q61818 Smad6-203ENSMUST00000179458 273 ntBASIC19.99■□□□□ 0.79
Rai1Q61818 Gm42569-201ENSMUST00000200539 472 ntBASIC19.99■□□□□ 0.79
Rai1Q61818 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rai1Q61818 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rai1Q61818 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.99■□□□□ 0.79
Rai1Q61818 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rai1Q61818 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rai1Q61818 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rai1Q61818 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rai1Q61818 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rai1Q61818 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rai1Q61818 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rai1Q61818 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rai1Q61818 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.97■□□□□ 0.79
Rai1Q61818 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.97■□□□□ 0.79
Rai1Q61818 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rai1Q61818 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rai1Q61818 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.96■□□□□ 0.79
Rai1Q61818 Gm10033-202ENSMUST00000211874 928 ntBASIC19.96■□□□□ 0.79
Rai1Q61818 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rai1Q61818 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms