Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Foxc1Q61572 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxc1Q61572 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxc1Q61572 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxc1Q61572 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.85□□□□□ -0.03
Foxc1Q61572 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.85□□□□□ -0.03
Foxc1Q61572 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.85□□□□□ -0.03
Foxc1Q61572 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxc1Q61572 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.85□□□□□ -0.03
Foxc1Q61572 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Foxc1Q61572 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Foxc1Q61572 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Gm13241-201ENSMUST00000094493 780 ntBASIC14.84□□□□□ -0.03
Foxc1Q61572 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Foxc1Q61572 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxc1Q61572 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Foxc1Q61572 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Foxc1Q61572 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxc1Q61572 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.83□□□□□ -0.04
Foxc1Q61572 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Foxc1Q61572 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxc1Q61572 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Foxc1Q61572 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxc1Q61572 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Foxc1Q61572 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxc1Q61572 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxc1Q61572 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.81□□□□□ -0.04
Foxc1Q61572 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxc1Q61572 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxc1Q61572 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.81□□□□□ -0.04
Foxc1Q61572 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Foxc1Q61572 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Foxc1Q61572 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Foxc1Q61572 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Foxc1Q61572 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Foxc1Q61572 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Foxc1Q61572 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Foxc1Q61572 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxc1Q61572 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxc1Q61572 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.79□□□□□ -0.04
Foxc1Q61572 Gm22238-201ENSMUST00000175222 88 ntBASIC14.79□□□□□ -0.04
Foxc1Q61572 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxc1Q61572 Gm9847-201ENSMUST00000052528 599 ntBASIC14.79□□□□□ -0.04
Foxc1Q61572 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Foxc1Q61572 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Foxc1Q61572 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.78□□□□□ -0.04
Foxc1Q61572 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.78□□□□□ -0.04
Foxc1Q61572 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Foxc1Q61572 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms