Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Clcn4Q61418 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Gm15039-201ENSMUST00000118914 875 ntBASIC18.7■□□□□ 0.58
Clcn4Q61418 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Clcn4Q61418 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcn4Q61418 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.7■□□□□ 0.58
Clcn4Q61418 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Clcn4Q61418 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Clcn4Q61418 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Gm9959-201ENSMUST00000068277 390 ntBASIC18.69■□□□□ 0.58
Clcn4Q61418 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcn4Q61418 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcn4Q61418 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.68■□□□□ 0.58
Clcn4Q61418 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcn4Q61418 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clcn4Q61418 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.67■□□□□ 0.58
Clcn4Q61418 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.67■□□□□ 0.58
Clcn4Q61418 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clcn4Q61418 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcn4Q61418 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.67■□□□□ 0.58
Clcn4Q61418 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.67■□□□□ 0.58
Clcn4Q61418 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn4Q61418 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Clcn4Q61418 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn4Q61418 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clcn4Q61418 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn4Q61418 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn4Q61418 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcn4Q61418 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn4Q61418 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Clcn4Q61418 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn4Q61418 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Clcn4Q61418 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn4Q61418 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.65■□□□□ 0.58
Clcn4Q61418 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clcn4Q61418 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn4Q61418 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcn4Q61418 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn4Q61418 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcn4Q61418 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.64■□□□□ 0.57
Clcn4Q61418 Etf1-202ENSMUST00000180351 108 ntBASIC18.64■□□□□ 0.57
Clcn4Q61418 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Clcn4Q61418 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Clcn4Q61418 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn4Q61418 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clcn4Q61418 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn4Q61418 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.62■□□□□ 0.57
Clcn4Q61418 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.62■□□□□ 0.57
Clcn4Q61418 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn4Q61418 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn4Q61418 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn4Q61418 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn4Q61418 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn4Q61418 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Clcn4Q61418 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms