Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six4Q61321 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six4Q61321 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six4Q61321 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Six4Q61321 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six4Q61321 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.7■□□□□ 0.9
Six4Q61321 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Six4Q61321 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six4Q61321 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six4Q61321 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Six4Q61321 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.69■□□□□ 0.9
Six4Q61321 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six4Q61321 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.69■□□□□ 0.9
Six4Q61321 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Six4Q61321 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six4Q61321 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Six4Q61321 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six4Q61321 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six4Q61321 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.67■□□□□ 0.9
Six4Q61321 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Six4Q61321 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.67■□□□□ 0.9
Six4Q61321 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six4Q61321 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Six4Q61321 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.66■□□□□ 0.9
Six4Q61321 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.66■□□□□ 0.9
Six4Q61321 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.66■□□□□ 0.9
Six4Q61321 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.66■□□□□ 0.9
Six4Q61321 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Six4Q61321 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six4Q61321 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Six4Q61321 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Six4Q61321 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Six4Q61321 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six4Q61321 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six4Q61321 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Six4Q61321 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six4Q61321 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Six4Q61321 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six4Q61321 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six4Q61321 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Six4Q61321 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six4Q61321 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Six4Q61321 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six4Q61321 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Six4Q61321 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Six4Q61321 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Six4Q61321 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Six4Q61321 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.63■□□□□ 0.89
Six4Q61321 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Six4Q61321 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Six4Q61321 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.62■□□□□ 0.89
Six4Q61321 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six4Q61321 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.61■□□□□ 0.89
Six4Q61321 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
Six4Q61321 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.61■□□□□ 0.89
Six4Q61321 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Six4Q61321 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six4Q61321 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six4Q61321 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms