Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hif1aQ61221 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hif1aQ61221 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hif1aQ61221 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hif1aQ61221 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.6■□□□□ 0.89
Hif1aQ61221 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.6■□□□□ 0.89
Hif1aQ61221 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hif1aQ61221 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hif1aQ61221 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hif1aQ61221 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hif1aQ61221 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hif1aQ61221 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.58■□□□□ 0.89
Hif1aQ61221 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hif1aQ61221 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.58■□□□□ 0.89
Hif1aQ61221 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hif1aQ61221 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.58■□□□□ 0.88
Hif1aQ61221 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hif1aQ61221 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.57■□□□□ 0.88
Hif1aQ61221 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Hif1aQ61221 Gm10420-201ENSMUST00000121713 882 ntBASIC20.57■□□□□ 0.88
Hif1aQ61221 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hif1aQ61221 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hif1aQ61221 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hif1aQ61221 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hif1aQ61221 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hif1aQ61221 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.56■□□□□ 0.88
Hif1aQ61221 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hif1aQ61221 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Hif1aQ61221 Cap2-205ENSMUST00000225824 1634 ntBASIC20.56■□□□□ 0.88
Hif1aQ61221 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hif1aQ61221 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hif1aQ61221 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.54■□□□□ 0.88
Hif1aQ61221 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hif1aQ61221 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hif1aQ61221 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hif1aQ61221 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hif1aQ61221 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.53■□□□□ 0.88
Hif1aQ61221 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hif1aQ61221 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.53■□□□□ 0.88
Hif1aQ61221 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hif1aQ61221 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Hif1aQ61221 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.52■□□□□ 0.88
Hif1aQ61221 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hif1aQ61221 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hif1aQ61221 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Hif1aQ61221 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hif1aQ61221 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hif1aQ61221 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hif1aQ61221 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hif1aQ61221 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hif1aQ61221 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hif1aQ61221 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hif1aQ61221 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hif1aQ61221 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hif1aQ61221 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.5■□□□□ 0.87
Hif1aQ61221 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms