Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.65■■□□□ 1.06
Znf235Q61116 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.65■■□□□ 1.06
Znf235Q61116 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Znf235Q61116 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Znf235Q61116 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Znf235Q61116 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Znf235Q61116 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Znf235Q61116 Gm12251-201ENSMUST00000117893 792 ntBASIC21.64■■□□□ 1.05
Znf235Q61116 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.64■■□□□ 1.05
Znf235Q61116 Mir7075-201ENSMUST00000184187 82 ntBASIC21.64■■□□□ 1.05
Znf235Q61116 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Znf235Q61116 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.63■■□□□ 1.05
Znf235Q61116 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.63■■□□□ 1.05
Znf235Q61116 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.63■■□□□ 1.05
Znf235Q61116 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.63■■□□□ 1.05
Znf235Q61116 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Znf235Q61116 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Znf235Q61116 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Znf235Q61116 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.62■■□□□ 1.05
Znf235Q61116 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Znf235Q61116 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.62■■□□□ 1.05
Znf235Q61116 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
Znf235Q61116 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.62■■□□□ 1.05
Znf235Q61116 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.62■■□□□ 1.05
Znf235Q61116 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Znf235Q61116 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
Znf235Q61116 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Znf235Q61116 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Znf235Q61116 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Znf235Q61116 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Znf235Q61116 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.61■■□□□ 1.05
Znf235Q61116 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Znf235Q61116 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Znf235Q61116 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Znf235Q61116 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Znf235Q61116 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.6■■□□□ 1.05
Znf235Q61116 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Znf235Q61116 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.6■■□□□ 1.05
Znf235Q61116 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Znf235Q61116 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Znf235Q61116 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.6■■□□□ 1.05
Znf235Q61116 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Znf235Q61116 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Znf235Q61116 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Znf235Q61116 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Znf235Q61116 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Znf235Q61116 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Znf235Q61116 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Znf235Q61116 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Znf235Q61116 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Znf235Q61116 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Znf235Q61116 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Znf235Q61116 Gm43173-201ENSMUST00000202246 593 ntBASIC21.58■■□□□ 1.05
Znf235Q61116 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Znf235Q61116 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Znf235Q61116 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.58■■□□□ 1.04
Znf235Q61116 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Znf235Q61116 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.57■■□□□ 1.04
Znf235Q61116 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.57■■□□□ 1.04
Znf235Q61116 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Znf235Q61116 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Znf235Q61116 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Znf235Q61116 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Znf235Q61116 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Znf235Q61116 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Znf235Q61116 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Znf235Q61116 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.55■■□□□ 1.04
Znf235Q61116 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Znf235Q61116 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.55■■□□□ 1.04
Znf235Q61116 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Znf235Q61116 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Znf235Q61116 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.55■■□□□ 1.04
Znf235Q61116 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Znf235Q61116 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Znf235Q61116 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Znf235Q61116 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.54■■□□□ 1.04
Znf235Q61116 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Znf235Q61116 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Znf235Q61116 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms