Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a4Q60857 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a4Q60857 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a4Q60857 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Slc6a4Q60857 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Slc6a4Q60857 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a4Q60857 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.02■□□□□ 0.96
Slc6a4Q60857 Gm43530-201ENSMUST00000195920 274 ntBASIC21.02■□□□□ 0.96
Slc6a4Q60857 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a4Q60857 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slc6a4Q60857 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slc6a4Q60857 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a4Q60857 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Slc6a4Q60857 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a4Q60857 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a4Q60857 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.01■□□□□ 0.95
Slc6a4Q60857 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a4Q60857 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a4Q60857 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21■□□□□ 0.95
Slc6a4Q60857 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a4Q60857 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21■□□□□ 0.95
Slc6a4Q60857 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21■□□□□ 0.95
Slc6a4Q60857 Gm43137-201ENSMUST00000198052 594 ntBASIC21■□□□□ 0.95
Slc6a4Q60857 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a4Q60857 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a4Q60857 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a4Q60857 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.99■□□□□ 0.95
Slc6a4Q60857 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Slc6a4Q60857 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a4Q60857 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Slc6a4Q60857 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a4Q60857 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a4Q60857 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc6a4Q60857 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a4Q60857 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a4Q60857 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.96■□□□□ 0.95
Slc6a4Q60857 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a4Q60857 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a4Q60857 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a4Q60857 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a4Q60857 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc6a4Q60857 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a4Q60857 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a4Q60857 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a4Q60857 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a4Q60857 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a4Q60857 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc6a4Q60857 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a4Q60857 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a4Q60857 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a4Q60857 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a4Q60857 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.93■□□□□ 0.94
Slc6a4Q60857 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.93■□□□□ 0.94
Slc6a4Q60857 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a4Q60857 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a4Q60857 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.93■□□□□ 0.94
Slc6a4Q60857 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a4Q60857 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a4Q60857 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.92■□□□□ 0.94
Slc6a4Q60857 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a4Q60857 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms