Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.19■□□□□ 0.66
Tnfaip3Q60769 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfaip3Q60769 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.19■□□□□ 0.66
Tnfaip3Q60769 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfaip3Q60769 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfaip3Q60769 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip3Q60769 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip3Q60769 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip3Q60769 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip3Q60769 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip3Q60769 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip3Q60769 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
Tnfaip3Q60769 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfaip3Q60769 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfaip3Q60769 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfaip3Q60769 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip3Q60769 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.13■□□□□ 0.65
Tnfaip3Q60769 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfaip3Q60769 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.13■□□□□ 0.65
Tnfaip3Q60769 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfaip3Q60769 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tnfaip3Q60769 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip3Q60769 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Gm12821-201ENSMUST00000120022 600 ntBASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfaip3Q60769 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfaip3Q60769 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms