Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1lQ5XFR0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1lQ5XFR0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1lQ5XFR0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1lQ5XFR0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pabpn1lQ5XFR0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pabpn1lQ5XFR0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pabpn1lQ5XFR0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1lQ5XFR0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1lQ5XFR0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1lQ5XFR0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pabpn1lQ5XFR0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.33■□□□□ 0.84
Pabpn1lQ5XFR0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pabpn1lQ5XFR0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Pabpn1lQ5XFR0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1lQ5XFR0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.31■□□□□ 0.84
Pabpn1lQ5XFR0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1lQ5XFR0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pabpn1lQ5XFR0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1lQ5XFR0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pabpn1lQ5XFR0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pabpn1lQ5XFR0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pabpn1lQ5XFR0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pabpn1lQ5XFR0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pabpn1lQ5XFR0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pabpn1lQ5XFR0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Pabpn1lQ5XFR0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pabpn1lQ5XFR0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms