Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.11■□□□□ 0.01
Trav7-2Q5R1I3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-2Q5R1I3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-2Q5R1I3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trav7-2Q5R1I3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-2Q5R1I3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-2Q5R1I3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Gm13238-201ENSMUST00000117655 780 ntBASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-2Q5R1I3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7-2Q5R1I3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7-2Q5R1I3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7-2Q5R1I3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7-2Q5R1I3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7-2Q5R1I3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7-2Q5R1I3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-2Q5R1I3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav7-2Q5R1I3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-2Q5R1I3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-2Q5R1I3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-2Q5R1I3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav7-2Q5R1I3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-2Q5R1I3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7-2Q5R1I3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7-2Q5R1I3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Gm10232-201ENSMUST00000089221 720 ntBASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-2Q5R1I3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-2Q5R1I3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms