Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8d-1Q5R1H8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8d-1Q5R1H8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8d-1Q5R1H8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8d-1Q5R1H8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8d-1Q5R1H8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8d-1Q5R1H8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8d-1Q5R1H8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav8d-1Q5R1H8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8d-1Q5R1H8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8d-1Q5R1H8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8d-1Q5R1H8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.54■□□□□ 0.24
Trav8d-1Q5R1H8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms