Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Gm9806-201ENSMUST00000051080 552 ntBASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Scarna2-201ENSMUST00000157560 414 ntBASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Gm16437-201ENSMUST00000025669 507 ntBASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav15-1-dv6-1Q5R1D2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms