Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tmem40Q4FJU9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tmem40Q4FJU9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Gm6139-201ENSMUST00000079261 882 ntBASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tmem40Q4FJU9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Gm9870-201ENSMUST00000063874 645 ntBASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.34■□□□□ 0.37
Tmem40Q4FJU9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tmem40Q4FJU9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Gm43137-201ENSMUST00000198052 594 ntBASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tmem40Q4FJU9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tmem40Q4FJU9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Tmem40Q4FJU9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmem40Q4FJU9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem40Q4FJU9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem40Q4FJU9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem40Q4FJU9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tmem40Q4FJU9 Mir7075-201ENSMUST00000184187 82 ntBASIC17.29■□□□□ 0.36
Tmem40Q4FJU9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmem40Q4FJU9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms