Protein–RNA interactions for Protein: Q3V3R4

Itga1, Integrin alpha-1, mousemouse

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itga1Q3V3R4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Itga1Q3V3R4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Itga1Q3V3R4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Itga1Q3V3R4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.96■□□□□ 0.95
Itga1Q3V3R4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.96■□□□□ 0.95
Itga1Q3V3R4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itga1Q3V3R4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itga1Q3V3R4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.95■□□□□ 0.94
Itga1Q3V3R4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Itga1Q3V3R4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Itga1Q3V3R4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Gm10399-202ENSMUST00000202768 748 ntBASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Itga1Q3V3R4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Itga1Q3V3R4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Itga1Q3V3R4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Itga1Q3V3R4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Itga1Q3V3R4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itga1Q3V3R4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.89■□□□□ 0.93
Itga1Q3V3R4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itga1Q3V3R4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itga1Q3V3R4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itga1Q3V3R4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Itga1Q3V3R4 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.88■□□□□ 0.93
Itga1Q3V3R4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.88■□□□□ 0.93
Itga1Q3V3R4 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.88■□□□□ 0.93
Itga1Q3V3R4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Itga1Q3V3R4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Itga1Q3V3R4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Itga1Q3V3R4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Rps24-207ENSMUST00000224568 714 ntBASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Gm9959-201ENSMUST00000068277 390 ntBASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Itga1Q3V3R4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Gm40881-201ENSMUST00000223397 166 ntBASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Itga1Q3V3R4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms