Protein–RNA interactions for Protein: Q3USW5

Foxred2, FAD-dependent oxidoreductase domain-containing protein 2, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred2Q3USW5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxred2Q3USW5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Foxred2Q3USW5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Foxred2Q3USW5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Foxred2Q3USW5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.83■□□□□ 0.93
Foxred2Q3USW5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Foxred2Q3USW5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Foxred2Q3USW5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Foxred2Q3USW5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Foxred2Q3USW5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Foxred2Q3USW5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxred2Q3USW5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.82■□□□□ 0.92
Foxred2Q3USW5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.82■□□□□ 0.92
Foxred2Q3USW5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxred2Q3USW5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxred2Q3USW5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Rps24-207ENSMUST00000224568 714 ntBASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.8■□□□□ 0.92
Foxred2Q3USW5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Foxred2Q3USW5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Gm14117-201ENSMUST00000122417 843 ntBASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxred2Q3USW5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Foxred2Q3USW5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Foxred2Q3USW5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
Foxred2Q3USW5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Foxred2Q3USW5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Foxred2Q3USW5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Gm45102-201ENSMUST00000207427 857 ntBASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Foxred2Q3USW5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxred2Q3USW5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxred2Q3USW5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.74■□□□□ 0.91
Foxred2Q3USW5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.74■□□□□ 0.91
Foxred2Q3USW5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Foxred2Q3USW5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Foxred2Q3USW5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Foxred2Q3USW5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 215.1 ms