Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Shisa3Q3UPR0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa3Q3UPR0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Shisa3Q3UPR0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa3Q3UPR0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa3Q3UPR0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Shisa3Q3UPR0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shisa3Q3UPR0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.61■□□□□ 0.41
Shisa3Q3UPR0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Shisa3Q3UPR0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shisa3Q3UPR0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.58■□□□□ 0.41
Shisa3Q3UPR0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.58■□□□□ 0.41
Shisa3Q3UPR0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shisa3Q3UPR0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.58■□□□□ 0.4
Shisa3Q3UPR0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa3Q3UPR0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa3Q3UPR0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa3Q3UPR0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa3Q3UPR0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shisa3Q3UPR0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shisa3Q3UPR0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shisa3Q3UPR0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa3Q3UPR0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa3Q3UPR0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa3Q3UPR0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa3Q3UPR0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shisa3Q3UPR0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Shisa3Q3UPR0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms