Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp30Q3UN04 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp30Q3UN04 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
Usp30Q3UN04 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.6■□□□□ 0.89
Usp30Q3UN04 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Usp30Q3UN04 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp30Q3UN04 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Gm8495-201ENSMUST00000188740 694 ntBASIC20.59■□□□□ 0.89
Usp30Q3UN04 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp30Q3UN04 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Gm18284-201ENSMUST00000172604 624 ntBASIC20.58■□□□□ 0.89
Usp30Q3UN04 Gm43173-201ENSMUST00000202246 593 ntBASIC20.58■□□□□ 0.89
Usp30Q3UN04 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp30Q3UN04 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp30Q3UN04 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp30Q3UN04 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp30Q3UN04 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp30Q3UN04 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp30Q3UN04 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp30Q3UN04 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Usp30Q3UN04 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Usp30Q3UN04 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.56■□□□□ 0.88
Usp30Q3UN04 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp30Q3UN04 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.55■□□□□ 0.88
Usp30Q3UN04 Gm12251-201ENSMUST00000117893 792 ntBASIC20.55■□□□□ 0.88
Usp30Q3UN04 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.55■□□□□ 0.88
Usp30Q3UN04 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp30Q3UN04 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp30Q3UN04 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Spcs1-204ENSMUST00000226782 949 ntBASIC20.53■□□□□ 0.88
Usp30Q3UN04 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp30Q3UN04 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp30Q3UN04 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.52■□□□□ 0.88
Usp30Q3UN04 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp30Q3UN04 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.52■□□□□ 0.87
Usp30Q3UN04 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp30Q3UN04 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.51■□□□□ 0.87
Usp30Q3UN04 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 265 ms