Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Naf1Q3UMQ8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Naf1Q3UMQ8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Naf1Q3UMQ8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Naf1Q3UMQ8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Serp2-204ENSMUST00000228055 705 ntBASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Naf1Q3UMQ8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.77■□□□□ 0.92
Naf1Q3UMQ8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Gm43137-201ENSMUST00000198052 594 ntBASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Naf1Q3UMQ8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Naf1Q3UMQ8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Naf1Q3UMQ8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Naf1Q3UMQ8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Naf1Q3UMQ8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Naf1Q3UMQ8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.73■□□□□ 0.91
Naf1Q3UMQ8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Naf1Q3UMQ8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Naf1Q3UMQ8 Gm6139-201ENSMUST00000079261 882 ntBASIC20.7■□□□□ 0.9
Naf1Q3UMQ8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Naf1Q3UMQ8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms