Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smcr8Q3UMB5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smcr8Q3UMB5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smcr8Q3UMB5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smcr8Q3UMB5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smcr8Q3UMB5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.95■■□□□ 1.1
Smcr8Q3UMB5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smcr8Q3UMB5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Smcr8Q3UMB5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smcr8Q3UMB5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smcr8Q3UMB5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smcr8Q3UMB5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Gm43137-201ENSMUST00000198052 594 ntBASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Smcr8Q3UMB5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smcr8Q3UMB5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smcr8Q3UMB5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smcr8Q3UMB5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smcr8Q3UMB5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smcr8Q3UMB5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smcr8Q3UMB5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Smcr8Q3UMB5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Smcr8Q3UMB5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smcr8Q3UMB5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smcr8Q3UMB5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smcr8Q3UMB5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.09
Smcr8Q3UMB5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Smcr8Q3UMB5 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.89■■□□□ 1.09
Smcr8Q3UMB5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smcr8Q3UMB5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smcr8Q3UMB5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smcr8Q3UMB5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smcr8Q3UMB5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smcr8Q3UMB5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Smcr8Q3UMB5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smcr8Q3UMB5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smcr8Q3UMB5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smcr8Q3UMB5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.86■■□□□ 1.09
Smcr8Q3UMB5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smcr8Q3UMB5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Smcr8Q3UMB5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.85■■□□□ 1.09
Smcr8Q3UMB5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smcr8Q3UMB5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smcr8Q3UMB5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smcr8Q3UMB5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smcr8Q3UMB5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smcr8Q3UMB5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smcr8Q3UMB5 Mir7075-201ENSMUST00000184187 82 ntBASIC21.83■■□□□ 1.09
Smcr8Q3UMB5 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.83■■□□□ 1.09
Smcr8Q3UMB5 Gm6139-201ENSMUST00000079261 882 ntBASIC21.83■■□□□ 1.09
Smcr8Q3UMB5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smcr8Q3UMB5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Smcr8Q3UMB5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smcr8Q3UMB5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms