Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf44Q3UHJ8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Gm7143-201ENSMUST00000222811 859 ntBASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf44Q3UHJ8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Gm9870-201ENSMUST00000063874 645 ntBASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf44Q3UHJ8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf44Q3UHJ8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf44Q3UHJ8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf44Q3UHJ8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf44Q3UHJ8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf44Q3UHJ8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf44Q3UHJ8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf44Q3UHJ8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf44Q3UHJ8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf44Q3UHJ8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf44Q3UHJ8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf44Q3UHJ8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf44Q3UHJ8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf44Q3UHJ8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnf44Q3UHJ8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf44Q3UHJ8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf44Q3UHJ8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf44Q3UHJ8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf44Q3UHJ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf44Q3UHJ8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf44Q3UHJ8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.68■□□□□ 0.74
Rnf44Q3UHJ8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf44Q3UHJ8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Rnf44Q3UHJ8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Rnf44Q3UHJ8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 Gm12922-201ENSMUST00000120626 809 ntBASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf44Q3UHJ8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf44Q3UHJ8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf44Q3UHJ8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Rnf44Q3UHJ8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf44Q3UHJ8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf44Q3UHJ8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms