Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Limch1Q3UH68 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Limch1Q3UH68 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Limch1Q3UH68 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Limch1Q3UH68 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Limch1Q3UH68 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.03■■□□□ 1.44
Limch1Q3UH68 Gm10399-202ENSMUST00000202768 748 ntBASIC24.03■■□□□ 1.44
Limch1Q3UH68 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.03■■□□□ 1.44
Limch1Q3UH68 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Limch1Q3UH68 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Limch1Q3UH68 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.01■■□□□ 1.43
Limch1Q3UH68 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Limch1Q3UH68 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Limch1Q3UH68 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Limch1Q3UH68 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Limch1Q3UH68 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24■■□□□ 1.43
Limch1Q3UH68 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Limch1Q3UH68 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Limch1Q3UH68 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Limch1Q3UH68 Gm12922-201ENSMUST00000120626 809 ntBASIC23.97■■□□□ 1.43
Limch1Q3UH68 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.97■■□□□ 1.43
Limch1Q3UH68 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.96■■□□□ 1.43
Limch1Q3UH68 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Limch1Q3UH68 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Limch1Q3UH68 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Limch1Q3UH68 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Limch1Q3UH68 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Limch1Q3UH68 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.95■■□□□ 1.42
Limch1Q3UH68 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.95■■□□□ 1.42
Limch1Q3UH68 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Limch1Q3UH68 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.94■■□□□ 1.42
Limch1Q3UH68 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Limch1Q3UH68 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Limch1Q3UH68 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Limch1Q3UH68 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Limch1Q3UH68 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Limch1Q3UH68 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Limch1Q3UH68 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Limch1Q3UH68 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.92■■□□□ 1.42
Limch1Q3UH68 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Limch1Q3UH68 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Limch1Q3UH68 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.91■■□□□ 1.42
Limch1Q3UH68 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Limch1Q3UH68 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Limch1Q3UH68 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 587.7 ms