Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cops9Q3U898 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Cops9Q3U898 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops9Q3U898 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.09□□□□□ -0.15
Cops9Q3U898 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.09□□□□□ -0.15
Cops9Q3U898 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops9Q3U898 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cops9Q3U898 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cops9Q3U898 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cops9Q3U898 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops9Q3U898 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops9Q3U898 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.07□□□□□ -0.16
Cops9Q3U898 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops9Q3U898 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Cops9Q3U898 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops9Q3U898 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops9Q3U898 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.07□□□□□ -0.16
Cops9Q3U898 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.06□□□□□ -0.16
Cops9Q3U898 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Cops9Q3U898 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.06□□□□□ -0.16
Cops9Q3U898 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cops9Q3U898 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cops9Q3U898 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cops9Q3U898 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.05□□□□□ -0.16
Cops9Q3U898 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops9Q3U898 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.04□□□□□ -0.16
Cops9Q3U898 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cops9Q3U898 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.04□□□□□ -0.16
Cops9Q3U898 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cops9Q3U898 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.04□□□□□ -0.16
Cops9Q3U898 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops9Q3U898 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cops9Q3U898 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cops9Q3U898 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops9Q3U898 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cops9Q3U898 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops9Q3U898 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.03□□□□□ -0.16
Cops9Q3U898 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cops9Q3U898 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops9Q3U898 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops9Q3U898 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops9Q3U898 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cops9Q3U898 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops9Q3U898 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops9Q3U898 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops9Q3U898 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.02□□□□□ -0.16
Cops9Q3U898 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cops9Q3U898 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cops9Q3U898 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops9Q3U898 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cops9Q3U898 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cops9Q3U898 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Cops9Q3U898 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.02□□□□□ -0.17
Cops9Q3U898 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops9Q3U898 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops9Q3U898 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops9Q3U898 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.01□□□□□ -0.17
Cops9Q3U898 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops9Q3U898 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms