Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Lins1Q3U1D0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Mir7075-201ENSMUST00000184187 82 ntBASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lins1Q3U1D0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lins1Q3U1D0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lins1Q3U1D0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lins1Q3U1D0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lins1Q3U1D0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lins1Q3U1D0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lins1Q3U1D0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lins1Q3U1D0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lins1Q3U1D0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Lins1Q3U1D0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Lins1Q3U1D0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lins1Q3U1D0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lins1Q3U1D0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lins1Q3U1D0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lins1Q3U1D0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lins1Q3U1D0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
Lins1Q3U1D0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lins1Q3U1D0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lins1Q3U1D0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lins1Q3U1D0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lins1Q3U1D0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Lins1Q3U1D0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lins1Q3U1D0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Lins1Q3U1D0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Lins1Q3U1D0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.33■■□□□ 1.49
Lins1Q3U1D0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lins1Q3U1D0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Lins1Q3U1D0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Gm18284-201ENSMUST00000172604 624 ntBASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Gm8495-201ENSMUST00000188740 694 ntBASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lins1Q3U1D0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Lins1Q3U1D0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lins1Q3U1D0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lins1Q3U1D0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Lins1Q3U1D0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Lins1Q3U1D0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lins1Q3U1D0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Gm43017-201ENSMUST00000198296 752 ntBASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.3■■□□□ 1.48
Lins1Q3U1D0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms