Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Colec11Q3SXB8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colec11Q3SXB8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Colec11Q3SXB8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Colec11Q3SXB8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Colec11Q3SXB8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.7■□□□□ 0.9
Colec11Q3SXB8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Colec11Q3SXB8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Colec11Q3SXB8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Colec11Q3SXB8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Gm7143-201ENSMUST00000222811 859 ntBASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colec11Q3SXB8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Gm9870-201ENSMUST00000063874 645 ntBASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colec11Q3SXB8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colec11Q3SXB8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Colec11Q3SXB8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Colec11Q3SXB8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.64■□□□□ 0.9
Colec11Q3SXB8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colec11Q3SXB8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Colec11Q3SXB8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Colec11Q3SXB8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Colec11Q3SXB8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Colec11Q3SXB8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Colec11Q3SXB8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Colec11Q3SXB8 Golgb1-201ENSMUST00000023534 498 ntBASIC20.63■□□□□ 0.89
Colec11Q3SXB8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Colec11Q3SXB8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Colec11Q3SXB8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Colec11Q3SXB8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.62■□□□□ 0.89
Colec11Q3SXB8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Colec11Q3SXB8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.62■□□□□ 0.89
Colec11Q3SXB8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms