Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nhej1Q3KNJ2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nhej1Q3KNJ2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.78■■□□□ 1.08
Nhej1Q3KNJ2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nhej1Q3KNJ2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Nhej1Q3KNJ2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nhej1Q3KNJ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nhej1Q3KNJ2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nhej1Q3KNJ2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.72■■□□□ 1.07
Nhej1Q3KNJ2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.71■■□□□ 1.07
Nhej1Q3KNJ2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms