Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim72Q1XH17 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trim72Q1XH17 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim72Q1XH17 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim72Q1XH17 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Gm45102-201ENSMUST00000207427 857 ntBASIC21.83■■□□□ 1.09
Trim72Q1XH17 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim72Q1XH17 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Trim72Q1XH17 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.83■■□□□ 1.08
Trim72Q1XH17 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim72Q1XH17 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim72Q1XH17 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.83■■□□□ 1.08
Trim72Q1XH17 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim72Q1XH17 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.08
Trim72Q1XH17 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim72Q1XH17 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim72Q1XH17 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim72Q1XH17 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.82■■□□□ 1.08
Trim72Q1XH17 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim72Q1XH17 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim72Q1XH17 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Trim72Q1XH17 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim72Q1XH17 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim72Q1XH17 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim72Q1XH17 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim72Q1XH17 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Trim72Q1XH17 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim72Q1XH17 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim72Q1XH17 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trim72Q1XH17 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim72Q1XH17 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.78■■□□□ 1.08
Trim72Q1XH17 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim72Q1XH17 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.78■■□□□ 1.08
Trim72Q1XH17 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim72Q1XH17 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim72Q1XH17 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim72Q1XH17 Gm14117-201ENSMUST00000122417 843 ntBASIC21.77■■□□□ 1.08
Trim72Q1XH17 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim72Q1XH17 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim72Q1XH17 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim72Q1XH17 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Trim72Q1XH17 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Gm9870-201ENSMUST00000063874 645 ntBASIC21.76■■□□□ 1.07
Trim72Q1XH17 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Trim72Q1XH17 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Gm22238-201ENSMUST00000175222 88 ntBASIC21.75■■□□□ 1.07
Trim72Q1XH17 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim72Q1XH17 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim72Q1XH17 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim72Q1XH17 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.74■■□□□ 1.07
Trim72Q1XH17 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim72Q1XH17 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim72Q1XH17 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim72Q1XH17 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim72Q1XH17 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.73■■□□□ 1.07
Trim72Q1XH17 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim72Q1XH17 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms