Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd8Q09XV5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Chd8Q09XV5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chd8Q09XV5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.85■□□□□ 0.61
Chd8Q09XV5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chd8Q09XV5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd8Q09XV5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd8Q09XV5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chd8Q09XV5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chd8Q09XV5 Gm6576-201ENSMUST00000169678 883 ntBASIC18.84■□□□□ 0.61
Chd8Q09XV5 Trmt13-210ENSMUST00000198454 880 ntBASIC18.84■□□□□ 0.61
Chd8Q09XV5 Gm7514-201ENSMUST00000209475 934 ntBASIC18.84■□□□□ 0.61
Chd8Q09XV5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.84■□□□□ 0.61
Chd8Q09XV5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.83■□□□□ 0.61
Chd8Q09XV5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd8Q09XV5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chd8Q09XV5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.83■□□□□ 0.6
Chd8Q09XV5 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.83■□□□□ 0.6
Chd8Q09XV5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chd8Q09XV5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chd8Q09XV5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.82■□□□□ 0.6
Chd8Q09XV5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chd8Q09XV5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.82■□□□□ 0.6
Chd8Q09XV5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chd8Q09XV5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Chd8Q09XV5 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.82■□□□□ 0.6
Chd8Q09XV5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd8Q09XV5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd8Q09XV5 Gm13234-201ENSMUST00000120010 747 ntBASIC18.81■□□□□ 0.6
Chd8Q09XV5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chd8Q09XV5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chd8Q09XV5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd8Q09XV5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.8■□□□□ 0.6
Chd8Q09XV5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.8■□□□□ 0.6
Chd8Q09XV5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Chd8Q09XV5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chd8Q09XV5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.8■□□□□ 0.6
Chd8Q09XV5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chd8Q09XV5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Chd8Q09XV5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd8Q09XV5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chd8Q09XV5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd8Q09XV5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd8Q09XV5 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.79■□□□□ 0.6
Chd8Q09XV5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd8Q09XV5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chd8Q09XV5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Reep4-203ENSMUST00000226563 1444 ntBASIC18.78■□□□□ 0.6
Chd8Q09XV5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chd8Q09XV5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.78■□□□□ 0.6
Chd8Q09XV5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd8Q09XV5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Gm5408-201ENSMUST00000197998 747 ntBASIC18.78■□□□□ 0.6
Chd8Q09XV5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.78■□□□□ 0.6
Chd8Q09XV5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chd8Q09XV5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd8Q09XV5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.77■□□□□ 0.6
Chd8Q09XV5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chd8Q09XV5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chd8Q09XV5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chd8Q09XV5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.77■□□□□ 0.59
Chd8Q09XV5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.76■□□□□ 0.59
Chd8Q09XV5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd8Q09XV5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Chd8Q09XV5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chd8Q09XV5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd8Q09XV5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd8Q09XV5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chd8Q09XV5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chd8Q09XV5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
Chd8Q09XV5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.75■□□□□ 0.59
Chd8Q09XV5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.75■□□□□ 0.59
Chd8Q09XV5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd8Q09XV5 Gm9987-201ENSMUST00000069768 567 ntBASIC18.75■□□□□ 0.59
Chd8Q09XV5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd8Q09XV5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd8Q09XV5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.74■□□□□ 0.59
Chd8Q09XV5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd8Q09XV5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.74■□□□□ 0.59
Chd8Q09XV5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd8Q09XV5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.74■□□□□ 0.59
Chd8Q09XV5 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.74■□□□□ 0.59
Chd8Q09XV5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.73■□□□□ 0.59
Chd8Q09XV5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd8Q09XV5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd8Q09XV5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chd8Q09XV5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chd8Q09XV5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms