Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Hoxc4Q08624 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc4Q08624 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc4Q08624 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxc4Q08624 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc4Q08624 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxc4Q08624 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.79■□□□□ 0.76
Hoxc4Q08624 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc4Q08624 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxc4Q08624 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc4Q08624 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
Hoxc4Q08624 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc4Q08624 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hoxc4Q08624 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hoxc4Q08624 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Gm8493-201ENSMUST00000196881 489 ntBASIC19.77■□□□□ 0.76
Hoxc4Q08624 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxc4Q08624 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Hoxc4Q08624 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc4Q08624 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxc4Q08624 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxc4Q08624 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc4Q08624 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc4Q08624 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc4Q08624 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.74■□□□□ 0.75
Hoxc4Q08624 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc4Q08624 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc4Q08624 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc4Q08624 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc4Q08624 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Hoxc4Q08624 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc4Q08624 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxc4Q08624 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Hoxc4Q08624 Spcs1-204ENSMUST00000226782 949 ntBASIC19.73■□□□□ 0.75
Hoxc4Q08624 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc4Q08624 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc4Q08624 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.72■□□□□ 0.75
Hoxc4Q08624 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc4Q08624 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Gm12251-201ENSMUST00000117893 792 ntBASIC19.71■□□□□ 0.75
Hoxc4Q08624 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.71■□□□□ 0.75
Hoxc4Q08624 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.71■□□□□ 0.75
Hoxc4Q08624 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms