Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf1Q07802 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ebf1Q07802 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf1Q07802 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Ebf1Q07802 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf1Q07802 Gm43017-201ENSMUST00000198296 752 ntBASIC20.68■□□□□ 0.9
Ebf1Q07802 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Ebf1Q07802 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf1Q07802 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf1Q07802 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ebf1Q07802 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Ebf1Q07802 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.67■□□□□ 0.9
Ebf1Q07802 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ebf1Q07802 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Ebf1Q07802 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ebf1Q07802 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ebf1Q07802 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.66■□□□□ 0.9
Ebf1Q07802 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ebf1Q07802 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ebf1Q07802 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Ebf1Q07802 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf1Q07802 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf1Q07802 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf1Q07802 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.65■□□□□ 0.9
Ebf1Q07802 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf1Q07802 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.65■□□□□ 0.9
Ebf1Q07802 Gm8493-201ENSMUST00000196881 489 ntBASIC20.65■□□□□ 0.9
Ebf1Q07802 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf1Q07802 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.65■□□□□ 0.9
Ebf1Q07802 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ebf1Q07802 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Ebf1Q07802 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ebf1Q07802 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf1Q07802 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.64■□□□□ 0.89
Ebf1Q07802 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.64■□□□□ 0.89
Ebf1Q07802 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ebf1Q07802 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.63■□□□□ 0.89
Ebf1Q07802 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ebf1Q07802 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ebf1Q07802 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Ebf1Q07802 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf1Q07802 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ebf1Q07802 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf1Q07802 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf1Q07802 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.62■□□□□ 0.89
Ebf1Q07802 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.62■□□□□ 0.89
Ebf1Q07802 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ebf1Q07802 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf1Q07802 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ebf1Q07802 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.61■□□□□ 0.89
Ebf1Q07802 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf1Q07802 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf1Q07802 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.61■□□□□ 0.89
Ebf1Q07802 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf1Q07802 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.61■□□□□ 0.89
Ebf1Q07802 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
Ebf1Q07802 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf1Q07802 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ebf1Q07802 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ebf1Q07802 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Ebf1Q07802 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.6■□□□□ 0.89
Ebf1Q07802 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ebf1Q07802 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.6■□□□□ 0.89
Ebf1Q07802 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ebf1Q07802 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf1Q07802 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf1Q07802 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ebf1Q07802 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf1Q07802 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf1Q07802 Gm7143-201ENSMUST00000222811 859 ntBASIC20.59■□□□□ 0.89
Ebf1Q07802 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ebf1Q07802 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ebf1Q07802 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms