Protein–RNA interactions for Protein: P70407

Cdh9, Cadherin-9, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh9P70407 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdh9P70407 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh9P70407 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdh9P70407 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh9P70407 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh9P70407 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh9P70407 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh9P70407 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdh9P70407 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.17■□□□□ 0.98
Cdh9P70407 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh9P70407 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdh9P70407 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.16■□□□□ 0.98
Cdh9P70407 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh9P70407 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cdh9P70407 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh9P70407 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Cdh9P70407 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdh9P70407 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh9P70407 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh9P70407 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.15■□□□□ 0.98
Cdh9P70407 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.15■□□□□ 0.98
Cdh9P70407 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.15■□□□□ 0.98
Cdh9P70407 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh9P70407 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cdh9P70407 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh9P70407 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cdh9P70407 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh9P70407 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh9P70407 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh9P70407 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh9P70407 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.14■□□□□ 0.97
Cdh9P70407 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh9P70407 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh9P70407 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.13■□□□□ 0.97
Cdh9P70407 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.13■□□□□ 0.97
Cdh9P70407 Gm43530-201ENSMUST00000195920 274 ntBASIC21.13■□□□□ 0.97
Cdh9P70407 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh9P70407 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh9P70407 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Cdh9P70407 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh9P70407 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh9P70407 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh9P70407 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh9P70407 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cdh9P70407 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh9P70407 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.09■□□□□ 0.97
Cdh9P70407 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.09■□□□□ 0.97
Cdh9P70407 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh9P70407 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
Cdh9P70407 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Cdh9P70407 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cdh9P70407 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.09■□□□□ 0.97
Cdh9P70407 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Cdh9P70407 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh9P70407 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh9P70407 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh9P70407 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh9P70407 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh9P70407 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh9P70407 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.08■□□□□ 0.97
Cdh9P70407 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.08■□□□□ 0.97
Cdh9P70407 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.08■□□□□ 0.97
Cdh9P70407 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cdh9P70407 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
Cdh9P70407 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cdh9P70407 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh9P70407 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh9P70407 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh9P70407 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh9P70407 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh9P70407 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh9P70407 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.07■□□□□ 0.96
Cdh9P70407 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms