Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sec61a1P61620 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.84■□□□□ 0.45
Sec61a1P61620 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.84■□□□□ 0.45
Sec61a1P61620 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sec61a1P61620 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sec61a1P61620 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sec61a1P61620 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sec61a1P61620 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sec61a1P61620 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sec61a1P61620 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sec61a1P61620 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a1P61620 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a1P61620 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a1P61620 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a1P61620 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Sec61a1P61620 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sec61a1P61620 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.83■□□□□ 0.44
Sec61a1P61620 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.82■□□□□ 0.44
Sec61a1P61620 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.82■□□□□ 0.44
Sec61a1P61620 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.82■□□□□ 0.44
Sec61a1P61620 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sec61a1P61620 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sec61a1P61620 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sec61a1P61620 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.81■□□□□ 0.44
Sec61a1P61620 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.81■□□□□ 0.44
Sec61a1P61620 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.81■□□□□ 0.44
Sec61a1P61620 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sec61a1P61620 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a1P61620 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a1P61620 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sec61a1P61620 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Sec61a1P61620 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sec61a1P61620 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sec61a1P61620 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sec61a1P61620 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a1P61620 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a1P61620 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a1P61620 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sec61a1P61620 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a1P61620 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a1P61620 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sec61a1P61620 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Sec61a1P61620 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sec61a1P61620 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sec61a1P61620 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sec61a1P61620 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sec61a1P61620 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sec61a1P61620 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sec61a1P61620 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sec61a1P61620 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a1P61620 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.76■□□□□ 0.43
Sec61a1P61620 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a1P61620 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a1P61620 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a1P61620 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a1P61620 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sec61a1P61620 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.75■□□□□ 0.43
Sec61a1P61620 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.75■□□□□ 0.43
Sec61a1P61620 Gm10232-201ENSMUST00000089221 720 ntBASIC17.75■□□□□ 0.43
Sec61a1P61620 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sec61a1P61620 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
Sec61a1P61620 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms