Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SmoP56726 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SmoP56726 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SmoP56726 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SmoP56726 Gm43530-201ENSMUST00000195920 274 ntBASIC20.63■□□□□ 0.89
SmoP56726 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SmoP56726 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SmoP56726 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SmoP56726 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SmoP56726 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SmoP56726 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SmoP56726 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SmoP56726 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SmoP56726 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.62■□□□□ 0.89
SmoP56726 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.62■□□□□ 0.89
SmoP56726 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.62■□□□□ 0.89
SmoP56726 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SmoP56726 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SmoP56726 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.62■□□□□ 0.89
SmoP56726 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SmoP56726 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SmoP56726 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 Gm12821-201ENSMUST00000120022 600 ntBASIC20.61■□□□□ 0.89
SmoP56726 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.61■□□□□ 0.89
SmoP56726 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 Gm27454-201ENSMUST00000185090 204 ntBASIC20.61■□□□□ 0.89
SmoP56726 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
SmoP56726 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.61■□□□□ 0.89
SmoP56726 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SmoP56726 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SmoP56726 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SmoP56726 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SmoP56726 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SmoP56726 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.6■□□□□ 0.89
SmoP56726 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.6■□□□□ 0.89
SmoP56726 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SmoP56726 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SmoP56726 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SmoP56726 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.6■□□□□ 0.89
SmoP56726 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.59■□□□□ 0.89
SmoP56726 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SmoP56726 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SmoP56726 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.59■□□□□ 0.89
SmoP56726 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SmoP56726 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SmoP56726 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.58■□□□□ 0.89
SmoP56726 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SmoP56726 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SmoP56726 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SmoP56726 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SmoP56726 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SmoP56726 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SmoP56726 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SmoP56726 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SmoP56726 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
SmoP56726 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SmoP56726 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SmoP56726 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SmoP56726 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SmoP56726 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.56■□□□□ 0.88
SmoP56726 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SmoP56726 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SmoP56726 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.55■□□□□ 0.88
SmoP56726 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SmoP56726 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SmoP56726 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.54■□□□□ 0.88
SmoP56726 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.54■□□□□ 0.88
SmoP56726 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms