Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.29■□□□□ 0.84
Atxn1P54254 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Atxn1P54254 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atxn1P54254 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atxn1P54254 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atxn1P54254 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Atxn1P54254 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.28■□□□□ 0.84
Atxn1P54254 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.28■□□□□ 0.84
Atxn1P54254 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atxn1P54254 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atxn1P54254 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.28■□□□□ 0.84
Atxn1P54254 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atxn1P54254 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atxn1P54254 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atxn1P54254 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.27■□□□□ 0.84
Atxn1P54254 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atxn1P54254 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atxn1P54254 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atxn1P54254 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.26■□□□□ 0.83
Atxn1P54254 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.26■□□□□ 0.83
Atxn1P54254 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.26■□□□□ 0.83
Atxn1P54254 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Atxn1P54254 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.26■□□□□ 0.83
Atxn1P54254 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atxn1P54254 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Atxn1P54254 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atxn1P54254 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.25■□□□□ 0.83
Atxn1P54254 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atxn1P54254 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atxn1P54254 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atxn1P54254 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.24■□□□□ 0.83
Atxn1P54254 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Atxn1P54254 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atxn1P54254 Gm12251-201ENSMUST00000117893 792 ntBASIC20.24■□□□□ 0.83
Atxn1P54254 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.24■□□□□ 0.83
Atxn1P54254 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atxn1P54254 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Atxn1P54254 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Atxn1P54254 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atxn1P54254 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atxn1P54254 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atxn1P54254 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atxn1P54254 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atxn1P54254 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Atxn1P54254 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Atxn1P54254 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atxn1P54254 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 Gm26833-201ENSMUST00000180899 440 ntBASIC20.22■□□□□ 0.83
Atxn1P54254 Gm43060-201ENSMUST00000200621 289 ntBASIC20.22■□□□□ 0.83
Atxn1P54254 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.22■□□□□ 0.83
Atxn1P54254 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atxn1P54254 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.21■□□□□ 0.83
Atxn1P54254 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atxn1P54254 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atxn1P54254 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.2■□□□□ 0.82
Atxn1P54254 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
Atxn1P54254 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atxn1P54254 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Atxn1P54254 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.2■□□□□ 0.82
Atxn1P54254 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atxn1P54254 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atxn1P54254 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Atxn1P54254 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atxn1P54254 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Atxn1P54254 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atxn1P54254 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.19■□□□□ 0.82
Atxn1P54254 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atxn1P54254 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.19■□□□□ 0.82
Atxn1P54254 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atxn1P54254 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atxn1P54254 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.18■□□□□ 0.82
Atxn1P54254 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.18■□□□□ 0.82
Atxn1P54254 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atxn1P54254 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Atxn1P54254 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Atxn1P54254 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.18■□□□□ 0.82
Atxn1P54254 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atxn1P54254 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atxn1P54254 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atxn1P54254 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atxn1P54254 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms