Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdx1P52946 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdx1P52946 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.23■□□□□ 0.83
Pdx1P52946 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdx1P52946 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdx1P52946 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdx1P52946 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdx1P52946 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.23■□□□□ 0.83
Pdx1P52946 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pdx1P52946 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdx1P52946 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
Pdx1P52946 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdx1P52946 Gm7143-201ENSMUST00000222811 859 ntBASIC20.22■□□□□ 0.83
Pdx1P52946 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdx1P52946 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdx1P52946 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdx1P52946 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdx1P52946 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdx1P52946 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Pdx1P52946 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdx1P52946 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdx1P52946 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
Pdx1P52946 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdx1P52946 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pdx1P52946 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdx1P52946 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.2■□□□□ 0.82
Pdx1P52946 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.2■□□□□ 0.82
Pdx1P52946 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.2■□□□□ 0.82
Pdx1P52946 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdx1P52946 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdx1P52946 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pdx1P52946 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdx1P52946 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.18■□□□□ 0.82
Pdx1P52946 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.18■□□□□ 0.82
Pdx1P52946 Gm9870-201ENSMUST00000063874 645 ntBASIC20.18■□□□□ 0.82
Pdx1P52946 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.18■□□□□ 0.82
Pdx1P52946 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdx1P52946 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pdx1P52946 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.17■□□□□ 0.82
Pdx1P52946 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.17■□□□□ 0.82
Pdx1P52946 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.17■□□□□ 0.82
Pdx1P52946 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Pdx1P52946 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdx1P52946 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pdx1P52946 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Pdx1P52946 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pdx1P52946 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdx1P52946 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdx1P52946 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Pdx1P52946 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdx1P52946 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pdx1P52946 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdx1P52946 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Pdx1P52946 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdx1P52946 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.16■□□□□ 0.82
Pdx1P52946 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdx1P52946 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdx1P52946 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pdx1P52946 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.15■□□□□ 0.82
Pdx1P52946 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pdx1P52946 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdx1P52946 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdx1P52946 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdx1P52946 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.15■□□□□ 0.82
Pdx1P52946 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pdx1P52946 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pdx1P52946 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdx1P52946 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdx1P52946 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
Pdx1P52946 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdx1P52946 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdx1P52946 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdx1P52946 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pdx1P52946 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.13■□□□□ 0.81
Pdx1P52946 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pdx1P52946 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdx1P52946 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdx1P52946 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.12■□□□□ 0.81
Pdx1P52946 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pdx1P52946 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms