Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt6aP50446 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Krt6aP50446 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt6aP50446 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt6aP50446 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.27■□□□□ 0.84
Krt6aP50446 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.27■□□□□ 0.84
Krt6aP50446 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt6aP50446 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Krt6aP50446 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Krt6aP50446 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.26■□□□□ 0.83
Krt6aP50446 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Krt6aP50446 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Krt6aP50446 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt6aP50446 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.25■□□□□ 0.83
Krt6aP50446 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Krt6aP50446 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.25■□□□□ 0.83
Krt6aP50446 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Krt6aP50446 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt6aP50446 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Krt6aP50446 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt6aP50446 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt6aP50446 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt6aP50446 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Krt6aP50446 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt6aP50446 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt6aP50446 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt6aP50446 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.22■□□□□ 0.83
Krt6aP50446 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Krt6aP50446 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Krt6aP50446 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Krt6aP50446 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.22■□□□□ 0.83
Krt6aP50446 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.22■□□□□ 0.83
Krt6aP50446 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.22■□□□□ 0.83
Krt6aP50446 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Krt6aP50446 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt6aP50446 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
Krt6aP50446 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Krt6aP50446 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Krt6aP50446 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Krt6aP50446 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.21■□□□□ 0.83
Krt6aP50446 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.21■□□□□ 0.83
Krt6aP50446 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt6aP50446 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt6aP50446 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Krt6aP50446 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt6aP50446 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Krt6aP50446 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.19■□□□□ 0.82
Krt6aP50446 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt6aP50446 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms