Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-1P50220 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-1P50220 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-1P50220 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-1P50220 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-1P50220 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx2-1P50220 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-1P50220 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx2-1P50220 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-1P50220 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx2-1P50220 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-1P50220 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.82■□□□□ 0.28
Nkx2-1P50220 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.82■□□□□ 0.28
Nkx2-1P50220 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.82■□□□□ 0.28
Nkx2-1P50220 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-1P50220 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-1P50220 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-1P50220 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.8■□□□□ 0.28
Nkx2-1P50220 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-1P50220 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.8■□□□□ 0.28
Nkx2-1P50220 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.8■□□□□ 0.28
Nkx2-1P50220 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx2-1P50220 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-1P50220 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-1P50220 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-1P50220 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx2-1P50220 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-1P50220 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms