Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sox6P40645 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.05■□□□□ 0.64
Sox6P40645 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.05■□□□□ 0.64
Sox6P40645 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.05■□□□□ 0.64
Sox6P40645 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sox6P40645 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Sox6P40645 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.04■□□□□ 0.64
Sox6P40645 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.04■□□□□ 0.64
Sox6P40645 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sox6P40645 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Sox6P40645 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox6P40645 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox6P40645 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Sox6P40645 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.03■□□□□ 0.64
Sox6P40645 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox6P40645 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox6P40645 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox6P40645 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox6P40645 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox6P40645 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sox6P40645 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox6P40645 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox6P40645 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox6P40645 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox6P40645 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox6P40645 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
Sox6P40645 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox6P40645 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.02■□□□□ 0.64
Sox6P40645 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sox6P40645 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox6P40645 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sox6P40645 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox6P40645 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox6P40645 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox6P40645 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox6P40645 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox6P40645 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.01■□□□□ 0.63
Sox6P40645 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox6P40645 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Sox6P40645 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox6P40645 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19■□□□□ 0.63
Sox6P40645 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox6P40645 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox6P40645 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox6P40645 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox6P40645 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox6P40645 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox6P40645 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sox6P40645 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox6P40645 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sox6P40645 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox6P40645 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox6P40645 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sox6P40645 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox6P40645 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox6P40645 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox6P40645 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox6P40645 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sox6P40645 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.98■□□□□ 0.63
Sox6P40645 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox6P40645 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox6P40645 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.98■□□□□ 0.63
Sox6P40645 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox6P40645 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.97■□□□□ 0.63
Sox6P40645 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox6P40645 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox6P40645 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sox6P40645 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox6P40645 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sox6P40645 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.97■□□□□ 0.63
Sox6P40645 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox6P40645 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.96■□□□□ 0.63
Sox6P40645 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Sox6P40645 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms