Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd9P40240 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd9P40240 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd9P40240 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd9P40240 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cd9P40240 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd9P40240 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd9P40240 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd9P40240 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cd9P40240 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.28■□□□□ 0.84
Cd9P40240 Gm7417-201ENSMUST00000192950 473 ntBASIC20.28■□□□□ 0.84
Cd9P40240 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.28■□□□□ 0.84
Cd9P40240 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd9P40240 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.28■□□□□ 0.84
Cd9P40240 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd9P40240 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd9P40240 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cd9P40240 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd9P40240 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd9P40240 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd9P40240 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd9P40240 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cd9P40240 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
Cd9P40240 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.26■□□□□ 0.83
Cd9P40240 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cd9P40240 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cd9P40240 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd9P40240 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cd9P40240 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd9P40240 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd9P40240 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd9P40240 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd9P40240 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd9P40240 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.24■□□□□ 0.83
Cd9P40240 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd9P40240 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd9P40240 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd9P40240 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd9P40240 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd9P40240 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.23■□□□□ 0.83
Cd9P40240 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.23■□□□□ 0.83
Cd9P40240 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.23■□□□□ 0.83
Cd9P40240 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd9P40240 Gm9870-201ENSMUST00000063874 645 ntBASIC20.23■□□□□ 0.83
Cd9P40240 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd9P40240 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd9P40240 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd9P40240 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cd9P40240 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd9P40240 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cd9P40240 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.22■□□□□ 0.83
Cd9P40240 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd9P40240 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.21■□□□□ 0.83
Cd9P40240 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.21■□□□□ 0.83
Cd9P40240 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cd9P40240 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cd9P40240 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.2■□□□□ 0.82
Cd9P40240 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd9P40240 Gm9959-201ENSMUST00000068277 390 ntBASIC20.2■□□□□ 0.82
Cd9P40240 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.2■□□□□ 0.82
Cd9P40240 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.2■□□□□ 0.82
Cd9P40240 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cd9P40240 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cd9P40240 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd9P40240 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd9P40240 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.19■□□□□ 0.82
Cd9P40240 Etf1-202ENSMUST00000180351 108 ntBASIC20.19■□□□□ 0.82
Cd9P40240 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.19■□□□□ 0.82
Cd9P40240 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cd9P40240 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd9P40240 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd9P40240 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd9P40240 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms