Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp13P33435 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp13P33435 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp13P33435 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp13P33435 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.86■□□□□ 0.93
Mmp13P33435 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Mmp13P33435 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.86■□□□□ 0.93
Mmp13P33435 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp13P33435 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.86■□□□□ 0.93
Mmp13P33435 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Mmp13P33435 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Mmp13P33435 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp13P33435 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp13P33435 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp13P33435 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Mmp13P33435 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp13P33435 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.85■□□□□ 0.93
Mmp13P33435 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp13P33435 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Mmp13P33435 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp13P33435 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp13P33435 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp13P33435 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Mmp13P33435 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp13P33435 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Mmp13P33435 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp13P33435 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp13P33435 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp13P33435 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp13P33435 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Mmp13P33435 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp13P33435 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Mmp13P33435 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp13P33435 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.83■□□□□ 0.93
Mmp13P33435 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Mmp13P33435 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Mmp13P33435 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Mmp13P33435 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp13P33435 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp13P33435 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp13P33435 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Mmp13P33435 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp13P33435 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp13P33435 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp13P33435 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.81■□□□□ 0.92
Mmp13P33435 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mmp13P33435 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.81■□□□□ 0.92
Mmp13P33435 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp13P33435 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Mmp13P33435 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Mmp13P33435 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp13P33435 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp13P33435 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp13P33435 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp13P33435 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp13P33435 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp13P33435 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp13P33435 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Mmp13P33435 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Mmp13P33435 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms