Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a11P31650 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a11P31650 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a11P31650 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a11P31650 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a11P31650 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a11P31650 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a11P31650 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
Slc6a11P31650 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.33■□□□□ 0.68
Slc6a11P31650 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a11P31650 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a11P31650 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a11P31650 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a11P31650 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.32■□□□□ 0.68
Slc6a11P31650 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a11P31650 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a11P31650 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a11P31650 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a11P31650 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a11P31650 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.31■□□□□ 0.68
Slc6a11P31650 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc6a11P31650 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slc6a11P31650 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a11P31650 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc6a11P31650 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc6a11P31650 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a11P31650 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a11P31650 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Slc6a11P31650 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a11P31650 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Slc6a11P31650 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a11P31650 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Slc6a11P31650 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a11P31650 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a11P31650 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a11P31650 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.27■□□□□ 0.68
Slc6a11P31650 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Slc6a11P31650 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Slc6a11P31650 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a11P31650 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc6a11P31650 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc6a11P31650 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc6a11P31650 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.26■□□□□ 0.67
Slc6a11P31650 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc6a11P31650 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms