Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RxrbP28704 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RxrbP28704 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RxrbP28704 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RxrbP28704 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RxrbP28704 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RxrbP28704 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RxrbP28704 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.58■□□□□ 0.89
RxrbP28704 Gm14523-201ENSMUST00000117260 558 ntBASIC20.58■□□□□ 0.89
RxrbP28704 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.58■□□□□ 0.89
RxrbP28704 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RxrbP28704 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RxrbP28704 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RxrbP28704 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RxrbP28704 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RxrbP28704 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.56■□□□□ 0.88
RxrbP28704 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RxrbP28704 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RxrbP28704 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
RxrbP28704 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RxrbP28704 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RxrbP28704 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RxrbP28704 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RxrbP28704 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RxrbP28704 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RxrbP28704 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RxrbP28704 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RxrbP28704 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RxrbP28704 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.53■□□□□ 0.88
RxrbP28704 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RxrbP28704 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RxrbP28704 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RxrbP28704 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RxrbP28704 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.53■□□□□ 0.88
RxrbP28704 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RxrbP28704 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RxrbP28704 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
RxrbP28704 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RxrbP28704 Gm11175-201ENSMUST00000116172 543 ntBASIC20.52■□□□□ 0.88
RxrbP28704 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.52■□□□□ 0.88
RxrbP28704 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RxrbP28704 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RxrbP28704 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
RxrbP28704 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RxrbP28704 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
RxrbP28704 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RxrbP28704 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RxrbP28704 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RxrbP28704 Gm7332-201ENSMUST00000118351 454 ntBASIC20.5■□□□□ 0.87
RxrbP28704 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.5■□□□□ 0.87
RxrbP28704 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RxrbP28704 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RxrbP28704 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RxrbP28704 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RxrbP28704 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RxrbP28704 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RxrbP28704 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
RxrbP28704 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RxrbP28704 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RxrbP28704 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RxrbP28704 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RxrbP28704 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RxrbP28704 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RxrbP28704 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.49■□□□□ 0.87
RxrbP28704 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
RxrbP28704 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RxrbP28704 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RxrbP28704 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RxrbP28704 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RxrbP28704 Gm27502-201ENSMUST00000183495 199 ntBASIC20.48■□□□□ 0.87
RxrbP28704 Mir6538-201ENSMUST00000183713 110 ntBASIC20.48■□□□□ 0.87
RxrbP28704 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.48■□□□□ 0.87
RxrbP28704 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RxrbP28704 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RxrbP28704 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RxrbP28704 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.46■□□□□ 0.87
RxrbP28704 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.46■□□□□ 0.87
RxrbP28704 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.46■□□□□ 0.87
RxrbP28704 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.46■□□□□ 0.87
RxrbP28704 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.46■□□□□ 0.87
RxrbP28704 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
RxrbP28704 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms