Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col8a2P25318 Gm27454-201ENSMUST00000185090 204 ntBASIC17.11■□□□□ 0.33
Col8a2P25318 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.11■□□□□ 0.33
Col8a2P25318 Gm7143-201ENSMUST00000222811 859 ntBASIC17.11■□□□□ 0.33
Col8a2P25318 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.11■□□□□ 0.33
Col8a2P25318 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col8a2P25318 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col8a2P25318 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col8a2P25318 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Col8a2P25318 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Col8a2P25318 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.1■□□□□ 0.33
Col8a2P25318 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.1■□□□□ 0.33
Col8a2P25318 Gm45417-201ENSMUST00000209533 758 ntBASIC17.1■□□□□ 0.33
Col8a2P25318 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col8a2P25318 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col8a2P25318 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Col8a2P25318 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col8a2P25318 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col8a2P25318 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col8a2P25318 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.09■□□□□ 0.33
Col8a2P25318 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col8a2P25318 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col8a2P25318 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col8a2P25318 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col8a2P25318 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col8a2P25318 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col8a2P25318 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col8a2P25318 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.08■□□□□ 0.32
Col8a2P25318 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.08■□□□□ 0.32
Col8a2P25318 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col8a2P25318 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Col8a2P25318 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col8a2P25318 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col8a2P25318 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.07■□□□□ 0.32
Col8a2P25318 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Col8a2P25318 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Col8a2P25318 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.07■□□□□ 0.32
Col8a2P25318 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Col8a2P25318 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Col8a2P25318 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col8a2P25318 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col8a2P25318 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Col8a2P25318 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col8a2P25318 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col8a2P25318 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col8a2P25318 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Col8a2P25318 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.05■□□□□ 0.32
Col8a2P25318 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col8a2P25318 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col8a2P25318 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col8a2P25318 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col8a2P25318 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col8a2P25318 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col8a2P25318 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col8a2P25318 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col8a2P25318 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.04■□□□□ 0.32
Col8a2P25318 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col8a2P25318 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col8a2P25318 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.03■□□□□ 0.32
Col8a2P25318 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.03■□□□□ 0.32
Col8a2P25318 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.03■□□□□ 0.32
Col8a2P25318 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col8a2P25318 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col8a2P25318 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.02■□□□□ 0.32
Col8a2P25318 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms