Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Gm7143-201ENSMUST00000222811 859 ntBASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Gm9870-201ENSMUST00000063874 645 ntBASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
Tnfrsf1bP25119 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1bP25119 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf1bP25119 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf1bP25119 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1bP25119 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf1bP25119 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tnfrsf1bP25119 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf1bP25119 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf1bP25119 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1bP25119 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf1bP25119 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1bP25119 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1bP25119 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfrsf1bP25119 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Tnfrsf1bP25119 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Tnfrsf1bP25119 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Tnfrsf1bP25119 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Gm12922-201ENSMUST00000120626 809 ntBASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Gm9847-201ENSMUST00000052528 599 ntBASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms